% ************************************************************************************************
% This is the main Thesis project file
%
% Copied the College of William & Mary thesis template written by Paul M. King 
% and modified by Andrew J. Norman for the same college
% and appropriated for the Kent State University thesis requirement 
% by Ramesh Raj Subedi (Dec 2006).
%
% Elena Amanda Long (Kent State University) took this template and spruced it up to fit hir 
% particular thesis and styling needs for a dissertation that will hopefully be defended by
% December of 2012
% ************************************************************************************************




% This is the general class declaration the Thesis Class
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	% You must have ksuthesis.cls in your classpath
	%\documentclass[10pt,oneside,openany,titlepage]{ksuthesis}
	\documentclass[12pt,oneside,openany,titlepage]{style/ksuthesis}
	%\documentclass[12pt,oneside,openany,titlepage]{wmthesis}
	%\documentclass[12pt,oneside]{ksuthesis}
% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^



% Include Extra Packages Here
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	% Use the Hypertex References package (if doing PDF)
%	\usepackage{hyperref}

	% Use the Vpage package which creates the proper Page Layout (USletter, USlegal, etc...)
	% see pages 88-89 of The LaTeX companion
	%\usepackage{Vmargin}

	% Defines useful physics scripts, especially used for bra-ket notation
	\input{style/physics_header.tex}

	% Use the doublespace package for linespacing
	\usepackage{style/doublespace} 

	% Use both the AMS math and symbols packages for equations
	\usepackage{amsmath}
	\usepackage{amssymb}

	% Set the font family to use for the thesis
	\usepackage{ifthen}
	% \usepackage{times,mathptmx}

	% Use the standard Graphicx Package
	% for graphics inclusion with the dvips driver
	\usepackage[dvips]{graphicx}
	\graphicspath{{.}{/thesis_bits/figures/}}	% look in this directory and the subdirectory called Figures

	% Use the EPS figure package for including encapsulated postscript figures
	\usepackage{epsfig}
	%\usepackage{psfig}
	
	% Use the standard Postscript Tricks package for graphics inclusion with the dvips driver
	%\usepackage{pstricks,pst-node,pst-text} 	%comment this when compiling in laptop

	% Use the PSFrag package for PS text replacement
	\usepackage{psfrag}

	% Use the TextCase package for special text caps
	\usepackage{textcase}

	% Use the Xspace package for proper spacing after macros
	\usepackage{xspace}

	% Use the Subfigure package to create arrays of figures
	\usepackage{subfigure}

	% Use the Calc package for integer opps
	\usepackage{calc}

	% Use the TabularX package to create special tables
	\usepackage{tabularx}
	
	% Use the enumerate package for custom lists
	\usepackage{enumerate}

	% use the Dcolumn package to allow for aligned columns in tables
	\usepackage{dcolumn}

	% Use the MakeIndex Package to generate an index
	\usepackage{makeidx}
	\makeindex
	
	% Use the Afterpage Package to flush out unprocessed floats
	\usepackage{afterpage}

	% Set the Paper Size to Letter
	%\setpapersize{USletter}

	% Set Up the margins to use 
	%\setmarginsrb{1in}{1in}{1in}{1in}{0pt}{10mm}{0pt}{5mm}
	
	%% Images with a different path to the parent latex file can
	%% be accessed with the `import' package (which may need to be
	%% installed) using
	\usepackage{import}
	
	% This should help make it easy to put the number of pages in the
	% abstract so I don't forget
	\usepackage{lastpage}
	
	% Hopefully this will let me use xcolor to help highlight tables
%	\usepackage{xcolor}

%	\usepackage{color}
%	\usepackage{pstricks}
	
	% The two lines below add numbers to sub subsections
	\setcounter{secnumdepth}{3}
	\setcounter{tocdepth}{3}
	
% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^


% Include your macro files here
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	% This includes any redefinition of commands or environments
	%\input{general_macros}						% Include the general macros
	%\input{kaon_macros}						% Include Kaon decay macros
	
	% If you are indexing include the \makeindex
	% command here and run an index pass
	%\makeindex								% Generate an index
% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^



% Begin the Text of the Main Document
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	\begin{document}							% Begin the document
	%\input{Margin_Marks}						% Overlay the Margins for the Thesis 
	\normalsize								% Return to Normal font size
	\begin{spacing}{2.0}							% Double Space the Text
	\input{thesis_bits/titlepage}					% Include the title page
	\input{thesis_bits/abstract}					% Include the abstract
	\input{thesis_bits/approval_page2}				% Include the approval page
	\tableofcontents							% Make a table of contents
	\listoffigures								% Make a list of figures
	\addcontentsline{toc}{chapter}{List of Figures}
	\listoftables								% Make a list of tables
	\addcontentsline{toc}{chapter}{List of Tables}
	\newpage
	\addcontentsline{toc}{chapter}{Acknowledgements}
	\input{thesis_bits/Acknowledgements}			% Include the acknowledgements
	\mainmatter								% Reset the Numbering to Arabic 1
	%\makehalftitle\thispagestyle{empty}			% Make the half page title
	
	
	% Include Chapters
	% *********************************************************************
	\large
	\input{thesis_bits/chapter_1}					% Include the Chapter 1 text (chapter_1.tex)
	\input{thesis_bits/chapter_2}					% Include the Chapter 2 text (chapter_2.tex)
	\input{thesis_bits/chapter_3}					% Include the Chapter 3 text (chapter_3.tex)
	\input{thesis_bits/chapter_4}					% Include the Chapter 4 text (chapter_4.tex)
	\input{thesis_bits/chapter_5}					% Include the Chapter 5 text (chapter_5.tex)
	\input{thesis_bits/chapter_6}					% Include the Chapter 6 text (chapter_6.tex)





%	\input{een-polarization-direction-definitions}

%	\input{een-layout-with-text.pdf_tex}
%	 \import{thesis_bits/Figures/}{een-layout-with-text.pdf_tex}
	

	% *********************************************************************

	\end{spacing}								% End of Main Thesis Text
% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^





\newpage
% Put Bibliographic information last
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	\bibliographystyle{prsty}						% Indicate citation in Phys. Rev. Lett. style
	\bibliography{thesis_bits/bibliography}			% Use the file ``bibliography.bib'' for the biblio
%	\input{bibliography}
	%\bibliographystyle{apalike}					% This uses (name, year) as the citation style
	%\bibliographystyle{apsrev}					% Indicate the sort by citation order style
% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^



% Include the appendicies here
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	%\addcontentsline{toc}{chapter}{}
	\appendix
	%\input{glossary}
	%\input{coordinate_system}
	%\input{veto.tex}							% Appendix with veto test
	% \input{efficiency}  
	\input{thesis_bits/collaboration.tex}				% Appendix with the collaboration info 
	\input{thesis_bits/veto_bars.tex}				% Appendix with the veto bar info 

% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^





% Include the author's vita here
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	%\vitaauthor{Elena Amanda Long}
	%\begin{thesisauthorvita}
	%\input{vita.tex}							% Include the vita
	%\end{thesisauthorvita}
% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^









% Include the University Microfiche Abstract here
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	\fontsize{10}{12}\selectfont
	%\begin{umiabstract}
	%\input{umiabstract.tex}						% Include UMI abstract
	%\end{umiabstract}
	\normalsize
% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^




% If you are indexing include the index format
% vvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvvv
	\begin{spacing}{1.0}
	%\printindex								% Print the Index
	\end{spacing}
% ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^


\end{document}							% End the document





























